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A compilation and categorization of next-generation sequencing resources

Omixon Variant Toolkit

Tool nameOmixon Variant Toolkit
URLhttps://www.omixon.com/omixon/index.htm
Important features1. Easy to use and highly accurate set of tools for detecting micro indels and SNP. 2. Aligns, maps and calls variants for color reads against a reference genome. 3. Runs on the Amazon Cloud.
Citations
Year of publicationNot available
Rank by usage frequency100
Comments
FunctionAlignment/Mapping, SNP discovery, Indel discovery
CategoryFree, Downloadable
License
Status
Input file formatCSFASTA/CSQUAL (ABI SOLiD), SAM
Output file formatSAM, VCF, GFF
Operating system
Operating language
PlatformABI SOLiD
Maintained by
Downloadable file format
Submission file format

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